Expert options

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The options in this table are meant for experts only. Don't use them unless you know what you are doing!

Flag	Default	Description
-seed <int>	random	Initial seed for random number generator. The seed is set using the system clock unless it is manually overridden with this option.
-no_warn		Turns warnings off, so that the -w file does not get printed.
-no_fill		Turns hole-filling off, so that SNPs included in the -g file but not in the lowest reference panel cannot contribute to the inference.
-no_remove		Prevents the program from discarding SNPs whose alleles cannot be aligned across panels.